Function reference • influ2

influ

Functions from the original influ R package.

influ-package influ: Influence in linear models

Influence: The influence prototype object.

Influence$new: Create a new Influence object.

Influence$init: Initialise the Influence object

Influence$calc: Perform necessary calculations

Influence$effects: Obtain the effects associated with a particular term in the model

Influence$stanPlot: Standardization plot

Influence$cdiPlot: A coefficient-distribution-influence (CDI) plot for a model term

Influence$influPlot: Influence plot

Influence$stepPlot: Step plot

Influence$cdiPlotAll: Plot a CDI plot for each of the terms in the model

Influence$stepAndInfluPlot: Step and influence plots

coeffs(): Obtain the coefficients associated with a particular term in the model

ses(): Obtain standard errors for the coefficients associated with a particular term in the model

influ2

Functions from the new influ2 R package.

influ2: Influence plots

get_bayes_R2(): Get Bayesian R2 for a list of models

get_coefs(): Get model coefficients

get_coefs_raw(): Get raw coefficients

get_index(): Get the standardised indices

get_influ(): Get the influence metric

get_influ2(): Get the influence metric

get_marginal(): Get model coefficients new version

get_unstandarsied(): Get the unstandardised indices

plot_bayesian_cdi(): Bayesian version of the CDI plot

plot_bayesian_cdi2(): Bayesian version of the CDI plot (depreciated)

plot_bubble(): Bubble plot

plot_compare(): Compare CPUE indices

plot_data_extent(): Data extent plot

plot_hurdle(): Plot the hurdle and positive components

plot_implied_residuals(): Plots predicted values versus residuals

plot_index(): Plot the standardised and unstandardised indices

plot_influ(): Plot the influence metric for all variables in a model

plot_predicted_residuals(): Plots predicted values versus residuals

plot_qq(): Bayesian version of the quantile-quantile plot

plot_step(): A Bayesian version of the step-plot

table_criterion(): Get table of various criterion

logit() logit(): Logit

inv_logit(): Inverse logit

logistic(): Logistic

id_var_type(): Identify the variable type

geo_mean(): Geometric mean

Data

Simulated data sets that are available.

lobsters_per_pot: Simulated CPUE data